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  • Rui Guo
    Member
    • Apr 2016
    • 18

    #1

    mhap polished sequence

    What is mhap polished sequences in the page http://www.cbcb.umd.edu/software/PBcR/MHAP/
    Are those corrected reads, but not assembled?
    Last edited by Rui Guo; 05-13-2016, 01:49 AM.
  • gconcepcion
    Member
    • Dec 2010
    • 68

    #2
    Originally posted by Rui Guo View Post
    What is mhap polished sequences in the page http://www.cbcb.umd.edu/software/PBcR/MHAP/
    Are those corrected reads, but not assembled?
    Yes, under the "MHAP Polished sequences and assembly" section, the "Polished sequences" should be the corrected but un-assembled subreads. The "contigs" are the assembly results from the "polished sequences", while Quiver "polishes" the assembly contigs.

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