Assembly through CAP 3

[shivam]

As I run cap 3 for EST sequences it shows the following error.
'shivam' is not recognized as an internal or external command,operable program or batch file .

this is the cap3 standalone version . Please help me to find out the error.

[mastal]

What happens if you just type

$ cap3

at the commandline prompt?

Have you specified the full path to your files so that cap3 knows where to find them?

[shivam]

I am trying to this in windows 7 ,
and as I run this command ,problem is same.and I am run it through cmd.
I attached he screenshot of this.

[mastal]

To run cap3 on the file ocimum, assuming that cap3 is compiled/installed and that ocimum is somewhere where the computer can find it, you have to type,

$ cap3 ocimum > ocimum.out&

[shivam]

thank you very much .