Originally posted by Jenzo
View Post
-
Solved: Before building we deleted ../src/shorty-string.o - after that everything was fine. Works also on 64-bit architecture. -
Yes, I'm trying it.. as conf-file you have to choose from these three options:Originally posted by michael_0214 View Post
'ab-strict' : Used for ABI Solid Data (it would be conf/ab-strict)
'helicos-strict' : Used for Helicos data (it would be conf/helicos-strict)
'solexa-strict' : Used for Illumina/Solexa data (it would be conf/solexa-strict)
When executing the build command, g++ does severeal things but stops with an error:
g++: ../obj/shorty_string.o : No such file or directory
All other needed *.o-files are generated automatically, except shorty_string.o
Does anyone know how to solve this problem? I already tried to copy another shorty-string.o from the ../src directory into ../obj but then there are a lot of undefined references..Last edited by Jenzo; 03-15-2011, 11:46 PM.Leave a comment:
-
A Problem with Shory
Have everyone installed the assembly software for SOLID data-Shorty on Ubuntu? A error occurs:"configuration file needed" in this step-./build conf/conf-file bin/shorty-assembler, can anyone give me a hand?
-
NGS has revolutionized clinical microbiology by offering new ways to identify and surveil pathogens without prior knowledge of the target. One popular approach is 16S rRNA and ITS amplicon sequencing, which targets specific microbial markers. But studies are increasingly incorporating shotgun metagenomics, a technique that sequences all DNA from a sample without targeting specific microbial markers. This approach allows more detailed taxonomic classification, detection...Yesterday, 06:46 AM -
Tumors contain complex mixtures of cell populations that evolve in response to treatment and host-specific factors. Tissue biopsies provide only static snapshots of a tumor’s state. But what if we could follow that evolution over time using a minimally invasive technique?
Liquid biopsies can detect tumor-derived material circulating in the bloodstream, providing a way to study treatment response, detect emerging resistance, and discover new biomarkers. Circulating...10-14-2026, 09:55 AM
Leave a comment: