Hi,
I'm interested in mapping solid reads to a database of non-coding RNAs (miRNA etc).
If I could convert the color-space data to DNA sequence I would consider using blat or blast.
Does a tool exist for conversion color-space->DNA?
Any suggestions for a good mapping tool/strategy for this?
I'm interested in mapping solid reads to a database of non-coding RNAs (miRNA etc).
If I could convert the color-space data to DNA sequence I would consider using blat or blast.
Does a tool exist for conversion color-space->DNA?
Any suggestions for a good mapping tool/strategy for this?
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