Hi Everyone,
We’ve released our ChIP-Seq workflow this week, available to anyone with a Free Basic Account inside of GenomeQuest. Like all of our NGS workflows, it runs in two basic steps: a mapping step and a downstream analysis step. We chose the MACS modeling software for peak modeling.
The GenomeQuest ChIP-Seq workflow outputs a heavily annotated sequence database, which can then be interactively filtered, grouped, sorted, and mined for peaks of interest. And this can all be connected to your RNA-Seq and resequencing data to get the global picture.
Researchers can go from their ChIP-Seq NGS runs directly to gene-based annotation of the peaks found by their biology, select regions of interest, or genes of interest, or peaks of a certain class, and drill down to see the actual evidence that backs up the call.
Please take a few minutes to view the ChIP-Seq video overview, provided by Henk Heus, Senior Director of Workflow Development.
Also, for a limited time, we are offering a 30-Day free Silver Account to the first 100 qualified registrants. If you are interested in this, please visit http://www.genomequest.com/45/silver-account-upgrade.
I invite your comments, questions, and suggestions.
Richard Resnick
VP, Software and Services
We’ve released our ChIP-Seq workflow this week, available to anyone with a Free Basic Account inside of GenomeQuest. Like all of our NGS workflows, it runs in two basic steps: a mapping step and a downstream analysis step. We chose the MACS modeling software for peak modeling.
The GenomeQuest ChIP-Seq workflow outputs a heavily annotated sequence database, which can then be interactively filtered, grouped, sorted, and mined for peaks of interest. And this can all be connected to your RNA-Seq and resequencing data to get the global picture.
Researchers can go from their ChIP-Seq NGS runs directly to gene-based annotation of the peaks found by their biology, select regions of interest, or genes of interest, or peaks of a certain class, and drill down to see the actual evidence that backs up the call.
Please take a few minutes to view the ChIP-Seq video overview, provided by Henk Heus, Senior Director of Workflow Development.
Also, for a limited time, we are offering a 30-Day free Silver Account to the first 100 qualified registrants. If you are interested in this, please visit http://www.genomequest.com/45/silver-account-upgrade.
I invite your comments, questions, and suggestions.
Richard Resnick
VP, Software and Services