143 results in 0.0031 seconds.
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Amplicon vs Shotgun Metagenomics – How Do I Choose?
Metagenomics is the study of microbial communities in their original habitats and gives a comprehensive insight into the biochemical and metabolic interactions... -
Trimmomatic error reading Fastq files
I'm trying to run Trimmomatic on some shotgun sequencing paired end files and while most of them are working (so I know the code isn't the problem), a...Last edited by lkazen; 10-12-2024, 09:33 AM. -
Novaseq Kit Selection and Metagenomic Shotgun sequencing advice
I have an incoming project to which they would like us to perform metagenomic library prep and sequencing. They intend to give us gDNA environmental samples... -
The Gut Microbiome based Health Index Challenge - CAMDA@ISMB 15-16 July, 2024, Montreal, Canada
Try your best & take the next CAMDA challenge: Develop a gut microbiome based Health Index! Exploit the Theater of Activity concept, and explore not...Starts07-15-2024Ends07-16-2024LocationMontreal, Canada -
Using Kraken2 with the human telomere to telomere genome (T2T)
Has anyone tried and succeeded in using the newest human genome version (T2T) in Kraken2 instead of the human hg38?
There are rumors that...Last edited by tatianaorli; 11-30-2023, 04:27 AM. -
Shallow shotgun metagenomics
Hi,
I am trying to switch from 16S to shotgun metagenomics, but as the number of samples is quite high (several hundreds of human stool samples),... -
De-duplication of shot-gun metagenomics sequence data
Hello,
I have several metagenomic datasets (from soil, animal faeces and river water samples) which were all generated using Illumina HiSeq,... -
Metagenomic read classifier
Hello,
I will be doing metagenomic sequencing on clinical samples with >99% expected human reads and few microbial reads, with the microbial... -
Problems with adaptor ligation - NEBNExtUltra II
Hello to you all,
I want to perform DNA seq and I am having issues in the step of ligating the adaptors to the sequences.
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Apply to Win FREE PacBio Sequencing | 2020 SMRT Grant
PacBio & Maryland Genomics are sponsoring FREE sequencing to help you explore the microbial world—from bacteria & fungi that are critical for... -
Space/microgravity simulation: Extract DNA for MinION
Hello,
I hope to collect samples from lava tubes (microbial mats on the walls and nearby soils) to perform a metagenomics analysis. I will... -
How to use ARB nifH database(Zehr et. al) for taxonomic assignment
Hello members,
I am new in metagenomics data analysis. Currently I am working on a nifH amplicon data. I have done quality filtering, merging and... -
Metagenomics, metatranscriptomics, and multi'omics for microbial community studies
Dear all,
due to the COVID-19 pandemic the Physalia course on "Metagenomics, metatranscriptomics, and multi'omics... -
Server hardware - when are too many cores too much
Hello!
our dept. wants to buy a new server for our computational biology needs. We work in the field of metagenomics, so our biggest workloads... -
Webinar: Sequencing the Gut Microbiome with Highly Accurate Long Reads
Learn how researchers are using PacBio HiFi sequencing to overcome common challenges in microbiome research, including ambiguous taxonomic assignments...
