Hi all, i m new to NGS assembly. I found this to be a nice place for discussion. I started off with velvet and ran the options of velveth and velvetg.
It gave me following results at the end.
***Final graph has 16 nodes and n50 of 24184, max 44966, total 100080, using 0/142858 reads****
When i used -unused reads yes option i get the following results which seems to be ok.
****Final graph has 16 nodes and n50 of 24184, max 44966, total 100080, using 135855/142858 reads****
Now, my query is in the "using 0/142858 reads", which it says only 0 reads were used ? Why is it 0/142858 Or does it mean something else.Could i please know the difference?
It gave me following results at the end.
***Final graph has 16 nodes and n50 of 24184, max 44966, total 100080, using 0/142858 reads****
When i used -unused reads yes option i get the following results which seems to be ok.
****Final graph has 16 nodes and n50 of 24184, max 44966, total 100080, using 135855/142858 reads****
Now, my query is in the "using 0/142858 reads", which it says only 0 reads were used ? Why is it 0/142858 Or does it mean something else.Could i please know the difference?
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