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  • xujie
    Member
    • Nov 2010
    • 11
    #1

    ask for help on soap

    Hi all, i got the raw data of re-sequencing now .i am looking forward to get the consensus sequence of the data and get the indel between 2 inbreed lines.
    i do the soapligner and get the *.soap file.
    however in the *.soap file ,i don't get the consensus seqence file.
    which software can get the consensus file ?

    i also run the soapdenovo.The raw data is in 10 depth ,20 files(paired ends).The soft analysis the data in 1 depth once a time.how can i deal with the results of 10 depth?

    It would be great if i get a positive reply for this

    Thanks in advance.
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