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  • TJC
    Junior Member
    • Sep 2010
    • 1
    #1

    piRNAs sequence files in fasta format for rat and mapping small RNA seq reads

    I would like to search in my small-rna sequence set for pirnas and mirna. I managed to quantify the mirnas from the small-rna sequences.

    I would like to know if there is any tool to find or predict the pirnas in the small-rna sequence dataset?
    Also, Is there any repository for pirnas where I can download the pirnas for rat in fasta format?

    Any information will be helpful.
    Thanks in advance
    TJC
    Tags: pirnas, small rna sequencing
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