NCBI standards for genome annotation after contig reduction
Hi community,
I have been using a bacterial draft genome from GenBank for RNA-seq project. In order to reduce genome contig number, I used L_RNA_scaffolder http://www.ncbi.nlm.nih.gov/pubmed/24010822tool, so I had to reannotate again this new genome.
My doubt is how to publish now my RNA-seq results because I have the differential expressed genes with new annotations. I heard about the 'correspondence tables' but I really don't now how this work.
Thank you so much,
All the best, Bernardo
I have been using a bacterial draft genome from GenBank for RNA-seq project. In order to reduce genome contig number, I used L_RNA_scaffolder http://www.ncbi.nlm.nih.gov/pubmed/24010822tool, so I had to reannotate again this new genome.
My doubt is how to publish now my RNA-seq results because I have the differential expressed genes with new annotations. I heard about the 'correspondence tables' but I really don't now how this work.
Thank you so much,
All the best, Bernardo