Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • yuyu
    started a topic Duplicates and 3' RNA sequencing of FFPE samples

    Duplicates and 3' RNA sequencing of FFPE samples

    Hi everyone
    I am currently working on RNA sequencing of poor quality formalin fixed samples
    I am using the Lexogen quantseq Kit sith sequencing using a Novaseq
    I am getting a very high percentage of duplicates that may be more than 90%
    But I think as we only sequence the end of transcripts, it is not overall not very surprising to have high rates of identical sequences? Do anyone have any feedback on this?
    Thanks+++
    Julien

Latest Articles

Collapse

  • seqadmin
    Addressing Off-Target Effects in CRISPR Technologies
    by seqadmin






    The first FDA-approved CRISPR-based therapy marked the transition of therapeutic gene editing from a dream to reality1. CRISPR technologies have streamlined gene editing, and CRISPR screens have become an important approach for identifying genes involved in disease processes2. This technique introduces targeted mutations across numerous genes, enabling large-scale identification of gene functions, interactions, and pathways3. Identifying the full range...
    08-27-2024, 04:44 AM
  • seqadmin
    Selecting and Optimizing mRNA Library Preparations
    by seqadmin



    Sequencing mRNA provides a snapshot of cellular activity, allowing researchers to study the dynamics of cellular processes, compare gene expression across different tissue types, and gain insights into the mechanisms of complex diseases. “mRNA’s central role in the dogma of molecular biology makes it a logical and relevant focus for transcriptomic studies,” stated Sebastian Aguilar Pierlé, Ph.D., Application Development Lead at Inorevia. “One of the major hurdles for...
    08-07-2024, 12:11 PM

ad_right_rmr

Collapse

News

Collapse

Topics Statistics Last Post
Started by seqadmin, 08-27-2024, 04:40 AM
0 responses
16 views
0 likes
Last Post seqadmin  
Started by seqadmin, 08-22-2024, 05:00 AM
0 responses
293 views
0 likes
Last Post seqadmin  
Started by seqadmin, 08-21-2024, 10:49 AM
0 responses
135 views
0 likes
Last Post seqadmin  
Started by seqadmin, 08-19-2024, 05:12 AM
0 responses
124 views
0 likes
Last Post seqadmin  
Working...
X