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  • foivos
    Junior Member
    • Mar 2014
    • 6

    #1

    Upload of simulated data for publication

    Hi guys

    Do you know what is the proper place to submit RNA-seq simulated data (fasta and bam) for a publication?

    I think GEO or SRA will not work for simulations. Any other option?

    Thank you in advance
  • GenoMax
    Senior Member
    • Feb 2008
    • 7142

    #2
    If you intend to make companion software available you could put the datasets up on sourceforge.

    Comment

    • Richard Finney
      Senior Member
      • Feb 2009
      • 701

      #3
      Dropbox and Google Drive are good places.

      Comment

      • foivos
        Junior Member
        • Mar 2014
        • 6

        #4
        Thank you for the responses.

        sourceforge is not an option as it is not accompanied by software.

        Dropbox or google drive would be an easy solution, but I am not sure whether journals accept this or not...

        Comment

        • GenoMax
          Senior Member
          • Feb 2008
          • 7142

          #5
          Can you share via web at your institution? This method is subject to not working after a time (you may leave, institution may decide to take the resource down) but I assume whatever you are publishing does not need to remain available in perpetuity.

          How big is the dataset you want to share?

          Comment

          • foivos
            Junior Member
            • Mar 2014
            • 6

            #6
            All files compressed are around 50gb.

            The thing is that I want others to download the files and use them... So I want them to be stored in a place that they will be available for long time...

            Comment

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