Discriminant Analysis for RNAseq data

[guanzhidao]

Dear all,

I am wondering if there is a good R package developed that can perform discriminant analysis for RNAseq data?

Guanzhidao

[chrisbala]

Discriminant Function RNAseq

Following up on this post, has anyone done something like this?

I'm envisioning taking transformed data from say DE-Seq2, and conducting discriminant analysis.

Anyone have experience coding this? Is there a way to use the SummarizedExperiment class from DE-Seq?

I'd like to use one of the variables in my DESeq analysis in discriminant analysis to compare groups.

THanks!