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  • buthercup_ch
    Member
    • Apr 2014
    • 41
    #1

    Input BAM files for Cufflinks

    Hello,

    Can I use the BAM file obtained after mapping of RNA-Seq reads using CLC Genomics Workbench as input for Cufflinks, in order to analyze differential expression?

    Thanks
    Tags: bacteria, bioinformatics, rna-seq
    • dpryan
      Devon Ryan
      • Jul 2011
      • 3478
      #2
      Call CLC and ask them, they'd be the only ones to know.

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