Unconfigured Ad

Collapse
X
Collapse
 
  • Page of 1
  • Time
  • Show
Clear All
new posts
Previous template Next
  • chrisbala
    Member
    • Jan 2010
    • 82
    #1

    DESeq getVarianceStabilizedData

    Hi everyone,

    I'm using DEseq (Developmental version) on MAC OSX.

    I'm trying to use the getVarianceStabilizedData function and am getting an error:

    Error in getVarianceStabilizedData(cds) :
    could not find function "estimateVarianceFunctionForMatrix"

    Is anyone else having this trouble? Any solutions?

    Thanks!
    Tags: deseq
    • Simon Anders
      Senior Member
      • Feb 2010
      • 995
      #2
      Hi Chris,

      currently, there is quite some development going on in the developmental version. Maybe I accidently broke something with this week's changes. Can you sent me all your commands, so I can try myself?

      Simon

        Comment

        • chrisbala
          Member
          • Jan 2010
          • 82
          #3
          Vsd

          Hi Simon,

          I just emailed you my commands. Let me know if you need further info.

          Thanks!

            Comment

            Previous template Next

            Latest Articles

            Collapse
            • kinpict.com
              Reply to 16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
              by kinpict.com
              The part about this topic feels surprisingly grounded, and the details on the page is the bit that made me slow down. I’d keep <a href="https://kinpict.com/">ai family photo generator</a> bookmarked for later.
              Today, 06:37 PM
            • SEQadmin2
              16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
              by SEQadmin2





              NGS has revolutionized clinical microbiology by offering new ways to identify and surveil pathogens without prior knowledge of the target. One popular approach is 16S rRNA and ITS amplicon sequencing, which targets specific microbial markers. But studies are increasingly incorporating shotgun metagenomics, a technique that sequences all DNA from a sample without targeting specific microbial markers. This approach allows more detailed taxonomic classification,...
              10-30-2026, 06:46 AM
            View All

            ad_right_rmr

            Collapse

            News

            Collapse
            Topics Statistics Last Post
            Gene Copies Once Dismissed as Junk DNA Shape Animal Adaptation and Human Disease by SEQadmin2
            Started by SEQadmin2, 11-12-2026, 07:59 AM
            0 responses
            27 views
            0 reactions
            		 Last Post SEQadmin2
            by SEQadmin2
            11-12-2026, 07:59 AM  
            WashU Medicine Study Verifies Methods for Tracking Genetic Mosaicism by SEQadmin2
            Started by SEQadmin2, 11-05-2026, 09:25 AM
            0 responses
            35 views
            0 reactions
            		 Last Post SEQadmin2
            by SEQadmin2
            11-05-2026, 09:25 AM  
            HuBMAP Portal Offers Free Access to Single-Cell Data from Healthy Human Tissues by SEQadmin2
            Started by SEQadmin2, 11-03-2026, 11:54 AM
            2 responses
            56 views
            0 reactions
            		 Last Post kinpict.com
            by kinpict.com
            Today, 06:49 PM  
            Genome Sequencing Reveals Large, Repeat-Rich DNA in Trapdoor Spider Named for Stephen Colbert by SEQadmin2
            Started by SEQadmin2, 10-28-2026, 09:57 AM
            0 responses
            175 views
            0 reactions
            		 Last Post SEQadmin2
            by SEQadmin2
            10-28-2026, 09:57 AM  
            View All
            Working...