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  • yksikaksi
    Member
    • Dec 2009
    • 20
    #1

    Convert csfasta to fastq

    Good day.

    I would like to know is there a must to include .qual file while converting the SOLiD .csfasta file format to .fastq file format for BWA alignment? I plan to use solid2fastq.pl to do the task.

    Thanks a lot.
    Tags: bwa, csfasta, fastq, solid, solid2fastq
    • nilshomer
      Nils Homer
      • Nov 2008
      • 1283
      #2
      Yes, the qual file holds the qualities.

        Comment

        • yksikaksi
          Member
          • Dec 2009
          • 20
          #3
          I see. Thanks for the information.

            Comment

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