How to run SIFT in Linux?

[clarissaboschi]

Hi, I installed SIFT software in Linux (http://sift.jcvi.org/), but I don’t know how to run (command lines) and how should be the input file for non human genomes (thousands of SNPs).

I did not find any information.

I know that I need a file with the protein sequences, but the substitutions should be in the same file with the coordinates?

thanks
C

[ersgupta]

download the code and the database from the sift website and follow the instructions in the readme... i guess its pretty straight forward.. lemme knw if u have any specific doubt in that...