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  • clarissaboschi
    Member
    • Apr 2010
    • 63
    #1

    How to run SIFT in Linux?

    Hi, I installed SIFT software in Linux (http://sift.jcvi.org/), but I don’t know how to run (command lines) and how should be the input file for non human genomes (thousands of SNPs).

    I did not find any information.

    I know that I need a file with the protein sequences, but the substitutions should be in the same file with the coordinates?

    thanks
    C
    Tags: linux, sift, snp
    • ersgupta
      Member
      • Jun 2011
      • 26
      #2
      download the code and the database from the sift website and follow the instructions in the readme... i guess its pretty straight forward.. lemme knw if u have any specific doubt in that...
      Last edited by ersgupta; 07-22-2012, 07:30 AM.

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