Hi,
I was working on some scripts that uses Ensembl perl API to pull out newest gene build and associated annotations. However, I went into trouble when trying to retrieve gene ontology annotations associated to genes. I know you can easily have this done using BioMart in Ensembl (external references in attributes), but seems tricky to me to achieve this by perl API. Anyone got any ideas? Thanks in advance.
Bin
I was working on some scripts that uses Ensembl perl API to pull out newest gene build and associated annotations. However, I went into trouble when trying to retrieve gene ontology annotations associated to genes. I know you can easily have this done using BioMart in Ensembl (external references in attributes), but seems tricky to me to achieve this by perl API. Anyone got any ideas? Thanks in advance.
Bin
Comment