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  • stevebaeyen
    Member
    • Aug 2011
    • 18
    #1

    SSR screening:better tools than RepeatFinder?

    Hi ,
    has anybody experience using SSR tools for repeat discovery in draft genomes? I will test Repeatfinder and Sputnik but I was wondering if there are other tools out there.
    Thanks for helping out!
    Tags: ssr
    • shivam
      Junior Member
      • Sep 2013
      • 7
      #2
      yes, There is also very good tool , MISA (Perl based) . I think it is really useful for you.
      if you successfully run the sputnik then please send me the procedure , How to run it.
      Thank You
      Joseph

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        • shivam
          Junior Member
          • Sep 2013
          • 7
          #3
          Sputnik (ssr finding tool)

          If anyone run sputnik (ssr finding tool) please send me the procedure , how to run that exe file.
          Joseph

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