Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
Collapse
 
  • Page of 1
  • Filter
  • Time
  • Show
Clear All
new posts
Previous template Next
  • #1

    How to merge contigs ordered by r2cat

    Hello everyone, I have an assembly of a metalibrary with newbler, so then I ordered my contigs with r2cat based on a reference of a mitochondrial genome. I got nice graphs, and now I would like to merge those contigs together in the order that they came out from r2cat. there are only a few gaps (which I would like to keep with NNN) and a few places where several contigs are overlapping (where I would like a consensus to be placed). Does any one know a program or script that would help me to merge them?

    thank you very much
    Tags: assembly, contigs, merge, overlapping contigs, r2cat
Previous template Next

Latest Articles

Collapse
  • seqadmin
    Recent Advances in Sequencing Technologies
    by seqadmin







    Innovations in next-generation sequencing technologies and techniques are driving more precise and comprehensive exploration of complex biological systems. Current advancements include improved accessibility for long-read sequencing and significant progress in single-cell and 3D genomics. This article explores some of the most impactful developments in the field over the past year.

    Long-Read Sequencing
    Long-read sequencing has...
    12-02-2024, 01:49 PM
  • seqadmin
    Genetic Variation in Immunogenetics and Antibody Diversity
    by seqadmin



    The field of immunogenetics explores how genetic variations influence immune responses and susceptibility to disease. In a recent SEQanswers webinar, Oscar Rodriguez, Ph.D., Postdoctoral Researcher at the University of Louisville, and Ruben Martínez Barricarte, Ph.D., Assistant Professor of Medicine at Vanderbilt University, shared recent advancements in immunogenetics. This article discusses their research on genetic variation in antibody loci, antibody production processes,...
    11-06-2024, 07:24 PM
View All

ad_right_rmr

Collapse

News

Collapse
Topics Statistics Last Post
Artificial Intelligence Shows Promise in Automating Functional Genomics Analysis by seqadmin
Started by seqadmin, 12-02-2024, 09:29 AM
0 responses
146 views
0 likes
 Last Post seqadmin
by seqadmin
12-02-2024, 09:29 AM  
Rethinking Epigenetic Clocks for Accurate Aging Measurements by seqadmin
Started by seqadmin, 12-02-2024, 09:06 AM
0 responses
51 views
0 likes
 Last Post seqadmin
by seqadmin
12-02-2024, 09:06 AM  
Researchers Capture Ribosome-mRNA Interactions in Atomic Detail by seqadmin
Started by seqadmin, 12-02-2024, 08:03 AM
0 responses
42 views
0 likes
 Last Post seqadmin
by seqadmin
12-02-2024, 08:03 AM  
Single-Cell Sequencing Links Early Genetic Mutations to Breast Cancer Development by seqadmin
Started by seqadmin, 11-22-2024, 07:36 AM
0 responses
73 views
0 likes
 Last Post seqadmin
by seqadmin
11-22-2024, 07:36 AM  
View All
Working...
X