Hello everyone, I have an assembly of a metalibrary with newbler, so then I ordered my contigs with r2cat based on a reference of a mitochondrial genome. I got nice graphs, and now I would like to merge those contigs together in the order that they came out from r2cat. there are only a few gaps (which I would like to keep with NNN) and a few places where several contigs are overlapping (where I would like a consensus to be placed). Does any one know a program or script that would help me to merge them?
thank you very much
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The complexity of cancer is clearly demonstrated in the diverse ecosystem of the tumor microenvironment (TME). The TME is made up of numerous cell types and its development begins with the changes that happen during oncogenesis. “Genomic mutations, copy number changes, epigenetic alterations, and alternative gene expression occur to varying degrees within the affected tumor cells,” explained Andrea O’Hara, Ph.D., Strategic Technical Specialist at Azenta. “As...-
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