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  • stephenhart
    Member
    • Sep 2011
    • 16

    count v dispersion plot

    I am analyzing my RNA-seq data with cummeRbund. I have four conditions, 5 biological replicates per condition. Why do the count vs dispersion plots look more or less identical for all four conditions? I can see from the cummeRbund vignette that this is supposed to be the case; I just don't know why.

    Any insights would be appreciated.

    Thanks.
  • jp.
    Senior Member
    • Jul 2013
    • 142

    #2
    Di you get the answer ?
    If yes, may you please explain me ?


    Originally posted by stephenhart View Post
    I am analyzing my RNA-seq data with cummeRbund. I have four conditions, 5 biological replicates per condition. Why do the count vs dispersion plots look more or less identical for all four conditions? I can see from the cummeRbund vignette that this is supposed to be the case; I just don't know why.

    Any insights would be appreciated.

    Thanks.

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