I've been looking for something that extracts the %mismatch by contig from a .bam file. (Not unlike the left navigation panel in Tablet does automatically.)
Unfortunately I have been unable to find anything. I can't imagine I'm the first person who has wanted this information.
Does anyone have any ideas/solutions to this problem?
Id rather not try to reinvent the wheel.
Unfortunately I have been unable to find anything. I can't imagine I'm the first person who has wanted this information.
Does anyone have any ideas/solutions to this problem?
Id rather not try to reinvent the wheel.
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