Gday all,
I am attempting to use SOAPsnpZ to call SNPs from SOLiD data that I aligned using SOAP2. After conducting the alignment I 'sorted' the output .txt file and when I try to feed it into the SNP caller I am getting this error message pretty much straight after program execution:
Reading Chromosome and dbSNP information Done.
terminate called after throwing an instance of 'std:ut_of_range'
what(): basic string::substr
Can anyone help me to solve this problem? It would be greatly appreciated! This is my first time using SOAP so I am still very much a beginner.
Cheers
Ash
I am attempting to use SOAPsnpZ to call SNPs from SOLiD data that I aligned using SOAP2. After conducting the alignment I 'sorted' the output .txt file and when I try to feed it into the SNP caller I am getting this error message pretty much straight after program execution:
Reading Chromosome and dbSNP information Done.
terminate called after throwing an instance of 'std:ut_of_range'
what(): basic string::substr
Can anyone help me to solve this problem? It would be greatly appreciated! This is my first time using SOAP so I am still very much a beginner.
Cheers
Ash
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