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  • BioTalk
    replied
    32- Bit system..How can I try it?

    Thank you

    Leave a comment:


  • BioTalk
    replied
    Originally posted by Xi Wang View Post
    You need to change the files executable by the command chmod.
    With the command Chmod I came to know that the file is executable, but I dont know the exact command, I should write to execute it.

    Leave a comment:


  • Xi Wang
    replied
    Originally posted by BioTalk View Post
    Here is the step wise method what I did :

    1. I downloaded Cufflinks-0.8.1.Linux_x86_64.tar.gz
    2. Untar Cufflinks-0.8.1.Linux_x86_64.tar.gz
    3. Moved cufflinks and cuffcompare to the path
    4. tried to execute Cufflinks and cuffcompare with ./cufflinks and ./cuffcompare respectively.
    5. Also I tried to give input of sam file with the command cuffliinks test_data.sam

    But it is throwing the error "Cannot execute binary file" every time I write any command. Please let me know if there are some other commands to work with it.

    Thank you

    EDIT: you may use the 32-bit system. I just tried a 32 bit system, it threw this error.
    you should download the source code, and compile it yourself.
    Last edited by Xi Wang; 02-16-2010, 07:56 AM.

    Leave a comment:


  • BioTalk
    replied
    Originally posted by Boel View Post
    Download cufflinks-0.8.1.Linux_x86_64.tar.gz
    Untar it: tar xvfz cufflinks-0.8.1.Linux_x86_64.tar.gz
    Move cufflinks and cuffcompare to your PATH.
    Here is the step wise method what I did :

    1. I downloaded Cufflinks-0.8.1.Linux_x86_64.tar.gz
    2. Untar Cufflinks-0.8.1.Linux_x86_64.tar.gz
    3. Moved cufflinks and cuffcompare to the path
    4. tried to execute Cufflinks and cuffcompare with ./cufflinks and ./cuffcompare respectively.
    5. Also I tried to give input of sam file with the command cuffliinks test_data.sam

    But it is throwing the error "Cannot execute binary file" every time I write any command. Please let me know if there are some other commands to work with it.

    Thank you

    Leave a comment:


  • Xi Wang
    replied
    Originally posted by BioTalk View Post
    It's a Linux Binary but it is not working.

    Can someone please write step wise commands/procedure to make it work!!

    Thank you
    How do you know it's a Linux Binary? Where did you get it?

    Leave a comment:


  • Boel
    replied
    step wise

    Download cufflinks-0.8.1.Linux_x86_64.tar.gz
    Untar it: tar xvfz cufflinks-0.8.1.Linux_x86_64.tar.gz
    Move cufflinks and cuffcompare to your PATH.

    Leave a comment:


  • BioTalk
    replied
    It's a Linux Binary but it is not working.

    Can someone please write step wise commands/procedure to make it work!!

    Thank you

    Leave a comment:


  • drio
    replied
    Originally posted by DrD2009 View Post
    Hey Guys,
    I am trying to install "Cufflink" in Linux machine but it is throwing an error "Cannot execute.exe file" every time, I try to execute Cufflinks.exe or any other exe files.

    Please help me if anyone know how to handle this..

    Thank you.
    Make sure you get the Linux binary:

    Leave a comment:


  • hdchen
    replied
    I think .exe file is for windows, not Linux. I'm not a Linux guy and I'm not sure.

    Leave a comment:


  • DrD2009
    started a topic Cufflink installation problem for Linux

    Cufflink installation problem for Linux

    Hey Guys,
    I am trying to install "Cufflink" in Linux machine but it is throwing an error "Cannot execute.exe file" every time, I try to execute Cufflinks.exe or any other exe files.

    Please help me if anyone know how to handle this..

    Thank you.

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