New Index

arcolombo698

Senior Member

Join Date: Nov 2013

Posts: 142
Share

Post
#1

New Index

12-02-2013, 04:45 PM

Hello.

Can I re-use the same reference genome that I previously used in my last project? or do I need to re-index the reference genome using Bowtie build command for every new project?
Tags: index
sBeier

Member

Join Date: Jan 2013

Posts: 41
Share

Post
#2

12-02-2013, 11:40 PM

Once you have indexed it, as long as you would re-index the same input files, you can of course reuse the old index files. The are not changed by the mapping process.
Comment

Previous template Next

Beyond CRISPR/Cas9: Understand, Choose, and Use the Right Genome Editing Tool

by SEQadmin2

CRISPR/Cas9 sparked the gene editing revolution for both research and therapeutics.¹ But this system still showed severe issues that limited its applications. The most prominent were the heavy reliance on PAM sequences, delivery limitations, double-stranded breaks that prompt unintended edits and cell death, and editing inefficiency (both in targeting and in knock-in reliability).

Despite this, “CRISPR helped turn genome editing from a specialized technique into...
- Channel: Articles
07-31-2026, 11:01 AM
Proteomic Platforms: How to Choose the Right Analytical Strategy to Improve Detection and Clinical Applications

by SEQadmin2

Proteomics platforms are evolving rapidly, with advances in mass spectrometry and affinity-based approaches expanding what researchers can detect and at what scale. As the field moves toward deeper proteome coverage and clinical applications, scientists face an increasingly complex landscape of tools. This article will explore how researchers are navigating these choices to find the right platform for their work.

The systematic characterization of the human proteome has...
- Channel: Articles
07-20-2026, 11:48 AM
Advanced Sequencing Platforms Tackle Neuroscience’s Toughest Genomics Problems

by SEQadmin2

Genomics studies in neuroscience face a special challenge due to the brain’s complexity and scarcity of samples. Mapping changes in cell type and state using conventional next-generation sequencing methods remains challenging. Advances in technologies like single-cell sequencing, spatial transcriptomics, and long-read sequencing have opened the door to deeper studies of the brain and diseases like Alzheimer’s, amyotrophic lateral sclerosis (ALS), and schizophrenia.
...
- Channel: Articles
07-09-2026, 11:10 AM

Topics	Statistics	Last Post
Consortium Completes First Full Diploid Human Genome by SEQadmin2 Started by SEQadmin2, Yesterday, 07:41 AM	0 responses 12 views 0 reactions	Last Post by SEQadmin2 Yesterday, 07:41 AM
Long-Read Sequencing Closes Decades-Old Gaps in the Medaka Genome by SEQadmin2 Started by SEQadmin2, 08-03-2026, 10:13 AM	0 responses 28 views 0 reactions	Last Post by SEQadmin2 08-03-2026, 10:13 AM
New Genomic Method Uncovers Ancient Hominin DNA by SEQadmin2 Started by SEQadmin2, 07-31-2026, 02:55 AM	0 responses 39 views 0 reactions	Last Post by SEQadmin2 07-31-2026, 02:55 AM
Study Captures the First Moments of DNA Replication by SEQadmin2 Started by SEQadmin2, 07-24-2026, 12:17 PM	0 responses 26 views 0 reactions	Last Post by SEQadmin2 07-24-2026, 12:17 PM

Unconfigured Ad

Comment

Latest Articles

ad_right_rmr

News