Assemble

[Desai]

Dear Friends,

Hey friends I want to know that how to perform assembly of Miseq data? Is there any tool or it is possible by some other way?

[GenoMax]

Here is a recent review of sequence assembly programs (you will need institutional/personal access to see the paper): http://www.nature.com/nrg/journal/v1...l/nrg3367.html

If you have access to MiSeq or BaseSpace then there are onboard tools that can be used (probably not going to be as flexible).

I assume you have bacterial/prokaryotic data.

[Sergioo]

Dear Friends,

Hey friends I want to know that how to perform assembly of Miseq data? Is there any tool or it is possible by some other way?

Another easy option is, to allow Miseq itself assemble your run. And you will get contigs as results of your run! Hope it helps