Originally posted by Desai
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Another easy option is, to allow Miseq itself assemble your run. And you will get contigs as results of your run! Hope it helps -
Here is a recent review of sequence assembly programs (you will need institutional/personal access to see the paper): http://www.nature.com/nrg/journal/v1...l/nrg3367.html
If you have access to MiSeq or BaseSpace then there are onboard tools that can be used (probably not going to be as flexible).
I assume you have bacterial/prokaryotic data.Leave a comment:
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