Hi,
I am new to shotgun metagenomics analysis. I have a project on the human gut microbiota. I know about MG-rast but I want to analyze my data by my own. I have done the quality checking and removal of host contaminated sequences. Now I want to check the taxonomical and functional profile of data. I have seen others use universal single copy marker genes reference. Where can I download these from?
And What is the next step.
Thanks
I am new to shotgun metagenomics analysis. I have a project on the human gut microbiota. I know about MG-rast but I want to analyze my data by my own. I have done the quality checking and removal of host contaminated sequences. Now I want to check the taxonomical and functional profile of data. I have seen others use universal single copy marker genes reference. Where can I download these from?
And What is the next step.
Thanks
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