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  • Morgis89
    Junior Member
    • Nov 2015
    • 3

    #1

    Problem with installation of blaSTorage

    Hey

    I have a problem with installation of blaSTorage on my ubuntu. I have a many results from standalone psiblast and i read that the new blast writing results in xml and using Biopython for parse many sequences is problematic. So i was looking for something else and found that package http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3571973/
    But the instalation is a problem becouse im not an ace in linux and the instalation file is not tar.gz as author said no more. Its zip. Seriously stupid problem but please, can someone help?

    Or can someone reccomend an alternative way?

    Also Im using Anaconda2.

    Regards
    M
  • GenoMax
    Senior Member
    • Feb 2008
    • 7142

    #2
    For reference cross-posted: https://www.biostars.org/p/183852/

    Try the option I suggested there.

    Comment

    • Morgis89
      Junior Member
      • Nov 2015
      • 3

      #3
      Blastorage

      Hey, thank you for help.
      I didnt know how to install python module (Im truly beginner )

      here what ive do:

      1. unziped this file
      2. in terminal cd to this folder where files was unziped
      3. in terminal typed "python setup install" setup file -> from unziped files
      4. check that module exist for python and can be imported (in my case in spyder, but it doesnt matter. it can be just python interpreter)

      realy light-hearted problem

      Regards

      Comment

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