I'm pleased to announce the tool 'cutadapt', which we have been using in our research group for adapter removal in high-throughput sequencing data. Removing adapter sequences from reads is necessary when the read length of the sequencing machine is longer than the molecule that is sequenced, for example when sequencing small RNAs.
Since special code is included to handle color space data correctly, the tool may be especially useful for people who do not use Applied Biosystem's Corona pipeline.
cutadapt is under the MIT license.
Please see the web page for a feature list and a link to a downloadable package:
Since special code is included to handle color space data correctly, the tool may be especially useful for people who do not use Applied Biosystem's Corona pipeline.
cutadapt is under the MIT license.
Please see the web page for a feature list and a link to a downloadable package:
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