MaSuRCA installation error

Febin@GC

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Join Date: Apr 2017

Posts: 3
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MaSuRCA installation error

04-27-2017, 07:55 PM

Hi
I was working on RNA sequence analysis of paired end sequence reads with Tuxedo pipeline. It required an additional installation of MaSuRCA genome assembler for assembling super reads. I downloaded the latest version, MaSuRCA-3.2.2_RC1 , and gave the following command in the MaSuRCA-3.2.2_RC1 directory for its installation.

# sudo ./install.sh

Since its a long output i have pasted it in paste bin and here is the corresponding pastebin link:

MaSuRCA output - Pastebin.com

https://pastebin.com/XLAT4itm

Pastebin.com is the number one paste tool since 2002. Pastebin is a website where you can store text online for a set period of time.

Due to the errors in between sr_config_example.txt file was not generated in MaSuRCA directory, and I couldn’t successfully run the perl command for assembling super reads. What could possibily be wrong here? Thanks in advance.

Febin@GC
Tags: rna seq
Febin@GC

Junior Member

Join Date: Apr 2017

Posts: 3
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#2

06-09-2017, 11:10 PM

Any updates?
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MaSuRCA installation error

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