Unconfigured Ad

Collapse
X
 
  • Time
  • Show
Clear All
new posts
  • rlh
    Member
    • Oct 2010
    • 12

    #1

    SRMA lose RG information

    when i finished SRMA re-align, i found that some of the reads lost its' RG (read group) information, GATK can not handle the database without RG information for the subsequent steps.
    anyone can help me?
  • nilshomer
    Nils Homer
    • Nov 2008
    • 1283

    #2
    Originally posted by rlh View Post
    when i finished SRMA re-align, i found that some of the reads lost its' RG (read group) information, GATK can not handle the database without RG information for the subsequent steps.
    anyone can help me?
    Submit this request to [email protected] and it may just be fixed for you .

    Comment

    • rlh
      Member
      • Oct 2010
      • 12

      #3
      Originally posted by nilshomer View Post
      Submit this request to [email protected] and it may just be fixed for you .
      thank you! i will do what you suggest.

      Comment

      Latest Articles

      Collapse

      • SEQadmin2
        16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
        by SEQadmin2




        NGS has revolutionized clinical microbiology by offering new ways to identify and surveil pathogens without prior knowledge of the target. One popular approach is 16S rRNA and ITS amplicon sequencing, which targets specific microbial markers. But studies are increasingly incorporating shotgun metagenomics, a technique that sequences all DNA from a sample without targeting specific microbial markers. This approach allows more detailed taxonomic classification, detection...
        Today, 06:46 AM
      • SEQadmin2
        Multiomic Liquid Biopsy: What DNA/RNA Panels Reveal That DNA Alone Can’t
        by SEQadmin2



        Tumors contain complex mixtures of cell populations that evolve in response to treatment and host-specific factors. Tissue biopsies provide only static snapshots of a tumor’s state. But what if we could follow that evolution over time using a minimally invasive technique?

        Liquid biopsies can detect tumor-derived material circulating in the bloodstream, providing a way to study treatment response, detect emerging resistance, and discover new biomarkers. Circulating
        ...
        10-14-2026, 09:55 AM

      ad_right_rmr

      Collapse

      News

      Collapse

      Topics Statistics Last Post
      Started by SEQadmin2, 10-28-2026, 09:57 AM
      0 responses
      22 views
      0 reactions
      Last Post SEQadmin2  
      Started by SEQadmin2, 10-28-2026, 09:51 AM
      0 responses
      14 views
      0 reactions
      Last Post SEQadmin2  
      Started by SEQadmin2, 10-22-2026, 11:13 AM
      0 responses
      67 views
      0 reactions
      Last Post SEQadmin2  
      Started by SEQadmin2, 10-22-2026, 10:48 AM
      0 responses
      47 views
      0 reactions
      Last Post SEQadmin2  
      Working...