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  • GenoMax
    replied
    Cross-posted on Biostars: https://www.biostars.org/p/312084/

    Leave a comment:


  • s18692001
    started a topic BBSplit result statistics

    BBSplit result statistics

    I use bbsplit.sh to run my analysis as following:
    Code:
    ./bbmap/bbsplit.sh in1=R1_001_bc_prefix.fastq.gz  in2=R2_001_bc_prefix.fastq.gz  ref=hg19.fa,mm10.fa  basename=out_%.bam threads=4  ambig2=best
    I want to know the mapping quality of the result. How can I access it?

    Simon

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  • seqadmin
    Best Practices for Single-Cell Sequencing Analysis
    by seqadmin



    While isolating and preparing single cells for sequencing was historically the bottleneck, recent technological advancements have shifted the challenge to data analysis. This highlights the rapidly evolving nature of single-cell sequencing. The inherent complexity of single-cell analysis has intensified with the surge in data volume and the incorporation of diverse and more complex datasets. This article explores the challenges in analysis, examines common pitfalls, offers...
    06-06-2024, 07:15 AM

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