Bioscope pairing pipeline

DNAjunk

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Join Date: Jun 2009

Posts: 62
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#1

Bioscope pairing pipeline

04-08-2011, 12:58 PM

Hi

Does anybody know how to correctly use parameters in the BioScope 1.3.1 pairing pipeline?

I wanted to set

pairing.mark.duplicates.processors.per.node = 1

in the pairing.ini files, however it is ignored and the program is using the default value

pairing.mark.duplicates.processors.per.node = 8

as can be seen in the temporary pairing.ini file that is output during calculation in the temp dirs.
Tags: bioscope, duplicate, pairing, solid

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