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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
0 reactions
 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,259 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
FLASH not pairing obvious reads by JamieHeather
Started by JamieHeather, 07-16-2013, 07:19 AM
10 responses
4,893 views
0 reactions
 Last Post JackieBadger
by JackieBadger
07-19-2013, 09:04 AM  
Bioperl MSG: seq doesn't validate fetch genbank from NCBI using GI by Shaq
Started by Shaq, 07-19-2013, 04:53 AM
1 response
2,056 views
0 reactions
 Last Post kmcarr
by kmcarr
07-19-2013, 09:03 AM  
Denovo Versus Mapping by pari_89
Started by pari_89, 07-19-2013, 06:32 AM
1 response
1,227 views
0 reactions
 Last Post rhinoceros
by rhinoceros
07-19-2013, 07:31 AM  
seq_crumbs memory issues by DrWorm
Started by DrWorm, 06-26-2013, 10:33 AM
2 responses
1,932 views
0 reactions
 Last Post DrWorm
by DrWorm
07-19-2013, 05:40 AM  
Should one instance of mpileup use a full thread? Computer running slowly. by Heisman
Started by Heisman, 07-18-2013, 12:08 PM
6 responses
1,674 views
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 Last Post lh3
by lh3
07-19-2013, 04:12 AM  
Question: Searching FASTA file for specific IDs by aw90
Started by aw90, 07-19-2013, 03:01 AM
1 response
1,465 views
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 Last Post rhinoceros
by rhinoceros
07-19-2013, 03:14 AM  
Dimension reduction on count data by sphil
Started by sphil, 07-19-2013, 12:34 AM
0 responses
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 Last Post sphil
by sphil
07-19-2013, 12:34 AM  
Comparison between two indvidual tissue samples from RNA seq by shikha5
Started by shikha5, 07-17-2013, 01:01 AM
8 responses
2,652 views
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 Last Post Jeremy
by Jeremy
07-18-2013, 11:35 PM  
individual versus universal primers in 454 pyrosequencing by fabigtz2
Started by fabigtz2, 07-17-2013, 05:26 PM
3 responses
1,724 views
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 Last Post rhinoceros
by rhinoceros
07-18-2013, 10:34 PM  
Alignment & visualisation of two similar contigs by TabeaK
Started by TabeaK, 07-18-2013, 04:55 AM
2 responses
1,589 views
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 Last Post TabeaK
by TabeaK
07-18-2013, 03:43 PM  
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