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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,260 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
What to do after finding differentially expressed genes? by sazz
Started by sazz, 07-15-2013, 09:44 AM
1 response
1,860 views
0 reactions
 Last Post dpryan
by dpryan
07-15-2013, 10:39 AM  
running Cuffdiff with biological replicates by Jane M
Started by Jane M, 09-04-2011, 11:29 PM
13 responses
12,289 views
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 Last Post twotwo
by twotwo
07-15-2013, 07:55 AM  
How would I go about calling BWA from a python script? by prs321
Started by prs321, 07-15-2013, 06:41 AM
6 responses
4,838 views
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 Last Post themerlin
by themerlin
07-15-2013, 07:48 AM  
lenght minimal of Contigs to analysis. by laboder
Started by laboder, 07-09-2013, 10:13 AM
8 responses
2,500 views
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 Last Post kbradnam
by kbradnam
07-15-2013, 07:41 AM  
cuffdiff problems: only got 3 records in the gene_exp.diff file by twotwo
Started by twotwo, 07-15-2013, 07:38 AM
0 responses
1,344 views
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 Last Post twotwo
by twotwo
07-15-2013, 07:38 AM  
picard installation on ubuntu 12.0.4 by cmccabe
Started by cmccabe, 07-15-2013, 06:00 AM
6 responses
10,074 views
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 Last Post cmccabe
by cmccabe
07-15-2013, 07:20 AM  
Genome_Coverage after assembly by pari_89
Started by pari_89, 07-14-2013, 01:48 AM
1 response
1,105 views
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 Last Post kbradnam
by kbradnam
07-15-2013, 06:09 AM  
How do I shorten a genome sequence to secure my workflow is properly functioning? by moritz1
Started by moritz1, 07-12-2013, 06:58 AM
10 responses
2,481 views
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 Last Post moritz1
by moritz1
07-15-2013, 05:35 AM  
general but important concepts by dejavu2010
Started by dejavu2010, 07-15-2013, 12:05 AM
1 response
1,146 views
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 Last Post syfo
by syfo
07-15-2013, 05:15 AM  
SOAP de novo Floating point exception by PlutonicFriend
Started by PlutonicFriend, 06-26-2012, 11:20 AM
1 response
2,425 views
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 Last Post macb
by macb
07-15-2013, 05:12 AM  
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