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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,260 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
average quality score for fastq file by jgibbons1
Started by jgibbons1, 03-25-2013, 05:32 AM
12 responses
15,064 views
0 reactions
 Last Post xApple
by xApple
07-16-2013, 01:13 PM  
Installing biopython by m.nyine
Started by m.nyine, 07-16-2013, 06:27 AM
2 responses
1,447 views
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 Last Post maubp
by maubp
07-16-2013, 12:46 PM  
Splitting FASTA files by aw90
Started by aw90, 07-16-2013, 04:17 AM
2 responses
12,688 views
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 Last Post sanjaysingh765
by sanjaysingh765
07-16-2013, 12:15 PM  
bwa-mem and quality trimming by nupurgupta
Started by nupurgupta, 07-16-2013, 10:54 AM
0 responses
2,227 views
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 Last Post nupurgupta
by nupurgupta
07-16-2013, 10:54 AM  
Array pseudocounts by ChR2
Started by ChR2, 07-16-2013, 09:31 AM
0 responses
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 Last Post ChR2
by ChR2
07-16-2013, 09:31 AM  
MiSeq Illumina output by mruizm
Started by mruizm, 07-16-2013, 12:16 AM
2 responses
1,544 views
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 Last Post mruizm
by mruizm
07-16-2013, 09:24 AM  
Contingency tests in R, Error with large numbers by jgibbons1
Started by jgibbons1, 07-16-2013, 06:49 AM
8 responses
5,389 views
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 Last Post jgibbons1
by jgibbons1
07-16-2013, 09:19 AM  
IGV - accessing BAM file from different server by adrian
Started by adrian, 07-16-2013, 08:58 AM
2 responses
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 Last Post dpryan
by dpryan
07-16-2013, 09:09 AM  
samtools converting sam>bam by Kienan
Started by Kienan, 07-12-2013, 01:19 AM
17 responses
22,147 views
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 Last Post Heisman
by Heisman
07-16-2013, 09:01 AM  
cufflinks multiple FPKM values for same location by abh
Started by abh, 04-08-2013, 10:34 AM
2 responses
2,175 views
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 Last Post SrCardgage
by SrCardgage
07-16-2013, 08:19 AM  
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