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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,260 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
How to compare de novo and reference mappings in SNPs analysis? by benjamin01
Started by benjamin01, 04-24-2013, 11:35 PM
0 responses
2,144 views
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 Last Post benjamin01
by benjamin01
04-24-2013, 11:35 PM  
FastG format? by adaptivegenome
Started by adaptivegenome, 06-12-2012, 12:38 PM
9 responses
6,134 views
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 Last Post kbradnam
by kbradnam
04-24-2013, 11:08 PM  
Quick poll: miRNAseq alignment stats by SEQquestions
Started by SEQquestions, 04-21-2013, 11:50 PM
1 response
1,312 views
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 Last Post SEQquestions
by SEQquestions
04-24-2013, 10:44 PM  
How BWA and Bowtie mention unique reads in SAM files? by Nico86
Started by Nico86, 04-24-2013, 01:17 PM
0 responses
2,444 views
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 Last Post Nico86
by Nico86
04-24-2013, 01:17 PM  
Changing Labels in CummeRbund-generated figures by dGho
Started by dGho, 04-24-2013, 07:06 AM
2 responses
2,195 views
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 Last Post dGho
by dGho
04-24-2013, 10:46 AM  
TAIR "GFF3" files are not GFF3? by Jonny_D
Started by Jonny_D, 04-20-2013, 09:57 AM
7 responses
2,145 views
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 Last Post AlexReynolds
by AlexReynolds
04-24-2013, 10:08 AM  
LAST output as SAM/BAM by elfuser
Started by elfuser, 04-23-2013, 04:14 PM
2 responses
4,061 views
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 Last Post maubp
by maubp
04-24-2013, 09:56 AM  
TMAP versus other aligners by quantrix
Started by quantrix, 04-23-2013, 12:04 PM
4 responses
8,985 views
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 Last Post quantrix
by quantrix
04-24-2013, 09:24 AM  
AWS AMI ID No records found by jmwhitha
Started by jmwhitha, 04-24-2013, 07:06 AM
0 responses
1,871 views
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 Last Post jmwhitha
by jmwhitha
04-24-2013, 07:06 AM  
a trans-chromosomal "proper pair"? by syfo
Started by syfo, 04-24-2013, 04:04 AM
0 responses
1,143 views
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 Last Post syfo
by syfo
04-24-2013, 04:04 AM  
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