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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,262 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
Bowtie optional fields in SAM question by history_of_robots
Started by history_of_robots, 07-05-2011, 04:49 PM
1 response
3,238 views
0 reactions
 Last Post vsravi
by vsravi
11-28-2011, 08:56 AM  
Variation analysis - tool recommendation by moty
Started by moty, 11-26-2011, 06:32 AM
5 responses
3,385 views
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 Last Post NGSfan
by NGSfan
11-28-2011, 06:52 AM  
Pindel optimization with Convey by FreeKDB
Started by FreeKDB, 11-28-2011, 04:52 AM
0 responses
1,871 views
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 Last Post FreeKDB
by FreeKDB
11-28-2011, 04:52 AM  
BWA trim doesn’t work. by CNVboy
Started by CNVboy, 11-27-2011, 05:52 PM
1 response
2,267 views
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 Last Post cjp
by cjp
11-28-2011, 03:57 AM  
question about glm in R by tujchl
Started by tujchl, 11-20-2011, 02:43 AM
3 responses
2,446 views
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 Last Post Wolfgang Huber
by Wolfgang Huber
11-28-2011, 01:25 AM  
BWA produces odd alignment results by dandyrilla
Started by dandyrilla, 11-27-2011, 09:40 PM
2 responses
3,518 views
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 Last Post dandyrilla
by dandyrilla
11-28-2011, 12:28 AM  
BWA samflag inconsistencies by Tally
Started by Tally, 11-24-2011, 04:36 PM
5 responses
4,571 views
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 Last Post Tally
by Tally
11-27-2011, 05:07 PM  
Inner distance value for TopHat / Proper mapping with RNA-Seq PE data by ocs
Started by ocs, 11-13-2011, 08:00 AM
6 responses
4,031 views
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 Last Post ozs2006
by ozs2006
11-27-2011, 11:10 AM  
estimation of metagenomic coverage? by raw937
Started by raw937, 11-27-2011, 01:10 AM
0 responses
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 Last Post raw937
by raw937
11-27-2011, 01:10 AM  
Solexa reads contamination by l.miozzi
Started by l.miozzi, 11-23-2011, 01:48 AM
2 responses
2,554 views
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 Last Post pmiguel
by pmiguel
11-26-2011, 04:14 PM  
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    Reply to 16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
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    16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
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 Last Post kinpict.com
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