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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,260 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
Help in converting Sam to Bam! by zhacker
Started by zhacker, 06-08-2011, 05:51 AM
15 responses
14,001 views
0 reactions
 Last Post bernardo_bello
by bernardo_bello
04-21-2013, 05:03 AM  
memory and cpu requirement for bwa by carolW
Started by carolW, 04-20-2013, 01:55 AM
3 responses
7,174 views
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 Last Post carolW
by carolW
04-20-2013, 08:52 AM  
mask contigs in scaffolds by length by Wallysb01
Started by Wallysb01, 04-20-2013, 08:36 AM
0 responses
4,859 views
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 Last Post Wallysb01
by Wallysb01
04-20-2013, 08:36 AM  
Local alignment of short reads: Mosaik, Bowtie2, BWA? by carmeyeii
Started by carmeyeii, 04-18-2013, 05:30 PM
1 response
5,935 views
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 Last Post shi
by shi
04-19-2013, 03:39 PM  
Odd results with Sickle FASTQ trimming by id0
Started by id0, 04-19-2013, 09:07 AM
0 responses
2,521 views
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 Last Post id0
by id0
04-19-2013, 09:07 AM  
scientific workflow systems: waste of time or boost of productivity? by Azazel
Started by Azazel, 04-19-2013, 02:07 AM
3 responses
2,101 views
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 Last Post Azazel
by Azazel
04-19-2013, 09:05 AM  
an error when run cufflinks by masylichu
Started by masylichu, 09-20-2011, 06:32 PM
6 responses
5,194 views
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 Last Post GenoMax
by GenoMax
04-19-2013, 09:01 AM  
GENE-counter installation problem by Jonny_D
Started by Jonny_D, 04-19-2013, 02:04 AM
1 response
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 Last Post Jonny_D
by Jonny_D
04-19-2013, 05:38 AM  
wired error profile by mingkunli
Started by mingkunli, 04-19-2013, 01:46 AM
0 responses
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 Last Post mingkunli
by mingkunli
04-19-2013, 01:46 AM  
Reconstuction of haplotypes based on a single SNP for European population by Stairway_2_7
Started by Stairway_2_7, 03-19-2013, 05:50 AM
1 response
1,512 views
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 Last Post Stairway_2_7
by Stairway_2_7
04-19-2013, 01:16 AM  
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