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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,262 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
Comparing trees by joxcargator73
Started by joxcargator73, 12-12-2012, 12:17 PM
1 response
1,331 views
0 reactions
 Last Post themerlin
by themerlin
12-12-2012, 02:25 PM  
250bp paired end Miseq reads alignment by empyrean
Started by empyrean, 12-06-2012, 07:58 PM
3 responses
3,792 views
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 Last Post swNGS
by swNGS
12-12-2012, 01:36 PM  
Software for sliding window by mathew
Started by mathew, 12-07-2012, 01:17 PM
6 responses
6,295 views
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 Last Post StevenW
by StevenW
12-12-2012, 10:16 AM  
Annotation viewing in IGV/Tablet - how to create an alias file by TabeaK
Started by TabeaK, 12-11-2012, 08:49 AM
4 responses
2,965 views
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 Last Post TabeaK
by TabeaK
12-12-2012, 09:25 AM  
BWA Not Printing QNAME in SAM File by cscswimmer227
Started by cscswimmer227, 12-12-2012, 07:52 AM
2 responses
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 Last Post cscswimmer227
by cscswimmer227
12-12-2012, 09:08 AM  
How to work with ENCODE RNA-seq fastq files? by Karenj
Started by Karenj, 12-12-2012, 06:58 AM
4 responses
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 Last Post Karenj
by Karenj
12-12-2012, 08:18 AM  
samseq in samr fdr cutoff by narges
Started by narges, 12-12-2012, 08:13 AM
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 Last Post narges
by narges
12-12-2012, 08:13 AM  
Determining alignment rate for Tophat by all_your_base
Started by all_your_base, 12-12-2012, 08:04 AM
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 Last Post all_your_base
by all_your_base
12-12-2012, 08:04 AM  
RNA-seq and normalization numbers by zee
Started by zee, 09-22-2008, 12:15 AM
52 responses
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 Last Post jparsons
by jparsons
12-12-2012, 06:44 AM  
Bismark and unique matches by mixter
Started by mixter, 11-28-2012, 06:06 AM
3 responses
3,837 views
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 Last Post fkrueger
by fkrueger
12-12-2012, 05:06 AM  
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