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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc
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Started by laura, 05-09-2011, 04:42 AM
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35 responses
107,323 views
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by laura
12-05-2013, 02:37 AM
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Started by sci_guy, 01-23-2008, 11:19 PM
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236 responses
682,933 views
1 reaction
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by ECO
12-25-2009, 06:45 PM
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Started by rahulvrane, 10-12-2012, 08:16 PM
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0 responses
2,227 views
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by rahulvrane
10-12-2012, 08:16 PM
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Started by LizBent, 10-12-2012, 06:12 AM
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3 responses
2,161 views
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by maubp
10-12-2012, 03:17 PM
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Started by jarwulf, 10-12-2012, 02:47 PM
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0 responses
1,205 views
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by jarwulf
10-12-2012, 02:47 PM
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Started by dgrayson, 10-12-2012, 02:10 PM
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1,363 views
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by dgrayson
10-12-2012, 02:10 PM
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Started by Mashin, 10-12-2012, 12:52 PM
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0 responses
2,364 views
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by Mashin
10-12-2012, 12:52 PM
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Started by bioman1, 10-12-2012, 10:16 AM
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0 responses
2,791 views
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by bioman1
10-12-2012, 10:16 AM
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Started by ikrier, 01-06-2010, 09:07 AM
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12 responses
11,796 views
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by swbarnes2
10-12-2012, 08:22 AM
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Started by rdoan, 10-12-2012, 07:17 AM
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0 responses
2,432 views
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by rdoan
10-12-2012, 07:17 AM
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Started by bioinfo816, 10-12-2012, 02:17 AM
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0 responses
1,132 views
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by bioinfo816
10-12-2012, 02:17 AM
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Started by bioinfo816, 10-12-2012, 02:13 AM
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0 responses
1,175 views
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by bioinfo816
10-12-2012, 02:13 AM
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by SEQadmin2
Childhood cancers, effectively fatal 60 years ago, are now curable for up to 85% of children with access to contemporary treatments and...-
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05-08-2026, 01:42 AM -
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by GATTACATLove this - good data definitely starts from good input, and poor input can only give relatively poor data. I particularly like the mention of Nanodrop/absorbance based methods for quantification. It's such a toss up if you'll get an accurate reading or what amounts to a randomly generated number, and a lot of library/sequencing related issues can be traced back to poor quant.
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Channel: Articles
07-01-2026, 11:43 AM -
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by SEQadmin2
I’m not a sequencing expert. I’m a purification scientist who uses NGS to evaluate workflows my group develops. With this perspective, we think about the sample first and the NGS workflow second. The sequencer is an exceptionally honest reporter, but it can only report on what you give it, so whether you get clean, interpretable data from an NGS workflow is largely determined before you begin.
Here are nine questions we think about, in roughly the order they matter, before...-
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by SEQadmin2
Data variability is still an issue in sequencing technologies despite the advances in reproducibility and accuracy of these platforms. But the problem does not originate in the sequencing itself, but in the previous steps, before the sample reaches the sequencer.
The first step is collection, followed by preservation and sample preparation for analysis. Most scientists overlook those steps, but not being careful might just be skewing the experiment’s results.
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Channel: Articles
06-02-2026, 10:05 AM -
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Started by SEQadmin2, 07-02-2026, 11:08 AM
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0 responses
22 views
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by SEQadmin2
07-02-2026, 11:08 AM
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Started by SEQadmin2, 06-30-2026, 05:37 AM
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0 responses
23 views
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by SEQadmin2
06-30-2026, 05:37 AM
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Started by SEQadmin2, 06-26-2026, 11:10 AM
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0 responses
22 views
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by SEQadmin2
06-26-2026, 11:10 AM
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