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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,260 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
Merging tophat2 outputs for tophat-fusion by NKAkers
Started by NKAkers, 08-13-2012, 04:40 PM
1 response
2,132 views
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 Last Post NKAkers
by NKAkers
08-15-2012, 05:40 PM  
Question: Information about the Caltech RNA-Seq data on ENCODE and its corresponding by tmy1018
Started by tmy1018, 07-05-2012, 06:58 AM
1 response
2,260 views
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 Last Post davisc
by davisc
08-15-2012, 12:04 PM  
vcf to haplotype by chocho
Started by chocho, 08-15-2012, 11:57 AM
0 responses
3,431 views
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 Last Post chocho
by chocho
08-15-2012, 11:57 AM  
sequence alignment by biouser
Started by biouser, 08-14-2012, 11:37 AM
10 responses
2,848 views
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 Last Post biouser
by biouser
08-15-2012, 11:55 AM  
Cuffdiff producing q-values > 1 by ocs
Started by ocs, 08-30-2011, 01:28 AM
7 responses
10,621 views
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 Last Post ypark28
by ypark28
08-15-2012, 10:26 AM  
TMAP: exception src/io/tmap_file.c by leukogenom
Started by leukogenom, 08-06-2012, 03:36 PM
2 responses
2,593 views
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 Last Post leukogenom
by leukogenom
08-15-2012, 08:44 AM  
Recommendation for CNV detection software in Illumina WGS data for cancer cells by yuhao
Started by yuhao, 08-09-2012, 12:58 PM
4 responses
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 Last Post yuhao
by yuhao
08-15-2012, 08:42 AM  
Need Help looking for Motif Search Programs! by Minkyu
Started by Minkyu, 08-13-2012, 10:21 AM
3 responses
1,763 views
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 Last Post mbblack
by mbblack
08-15-2012, 07:16 AM  
Picard and GATK by poisson200
Started by poisson200, 06-16-2011, 08:26 AM
6 responses
7,134 views
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 Last Post blanco
by blanco
08-15-2012, 07:04 AM  
software for genome assisted scaffolding by sasignor
Started by sasignor, 08-10-2012, 01:16 PM
4 responses
2,762 views
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 Last Post sasignor
by sasignor
08-14-2012, 04:08 PM  
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