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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,259 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
Velvet-Memory usage by VNou
Started by VNou, 07-05-2012, 09:40 AM
0 responses
1,654 views
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 Last Post VNou
by VNou
07-05-2012, 09:40 AM  
Generating mutations with WGSim by dkhavari
Started by dkhavari, 07-05-2012, 09:06 AM
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 Last Post dkhavari
by dkhavari
07-05-2012, 09:06 AM  
GATK re aligner step doubles file size? by manducasexta
Started by manducasexta, 06-18-2012, 01:59 PM
7 responses
2,771 views
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 Last Post manducasexta
by manducasexta
07-05-2012, 08:50 AM  
Text file editing_perl-GFF by bioman1
Started by bioman1, 07-05-2012, 08:47 AM
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 Last Post bioman1
by bioman1
07-05-2012, 08:47 AM  
GFF editing-Perl, awk by bioman1
Started by bioman1, 07-05-2012, 08:42 AM
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 Last Post bioman1
by bioman1
07-05-2012, 08:42 AM  
Using Cytoscape in command lines by RTK45
Started by RTK45, 07-05-2012, 07:18 AM
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 Last Post RTK45
by RTK45
07-05-2012, 07:18 AM  
csfasta + qual to fastq by moriah
Started by moriah, 07-05-2012, 04:11 AM
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 Last Post moriah
by moriah
07-05-2012, 04:11 AM  
Cufflinks annotation handling business by epi
Started by epi, 03-01-2012, 07:57 AM
16 responses
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 Last Post vkartha
by vkartha
07-05-2012, 04:06 AM  
estimate genome size through kmer analysis by plantae
Started by plantae, 07-05-2012, 03:46 AM
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 Last Post plantae
by plantae
07-05-2012, 03:46 AM  
How to get statistics data from sam/bam file generated by trinity packages by taoxiang180
Started by taoxiang180, 07-04-2012, 11:25 PM
1 response
4,271 views
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 Last Post dariober
by dariober
07-05-2012, 12:46 AM  
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