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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,260 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
How to deal with the document of SAM by luckylove
Started by luckylove, 06-25-2012, 05:31 AM
4 responses
2,039 views
0 reactions
 Last Post luckylove
by luckylove
06-26-2012, 01:08 AM  
file separation by rechu
Started by rechu, 06-25-2012, 09:12 PM
0 responses
1,021 views
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 Last Post rechu
by rechu
06-25-2012, 09:12 PM  
Unmapped_reads by rechu
Started by rechu, 06-25-2012, 09:07 PM
0 responses
1,031 views
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 Last Post rechu
by rechu
06-25-2012, 09:07 PM  
Where is Casava's Demux Multithreaded? by lednakashim
Started by lednakashim, 06-06-2012, 08:39 AM
2 responses
1,446 views
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 Last Post lednakashim
by lednakashim
06-25-2012, 03:20 PM  
Haplotype calls from Amplicon Sequencing by empyrean
Started by empyrean, 06-25-2012, 12:34 PM
3 responses
2,209 views
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 Last Post JackieBadger
by JackieBadger
06-25-2012, 02:27 PM  
cuffdiff log2(FC) when 1 condition has 0 counts by crh
Started by crh, 06-25-2012, 12:08 PM
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 Last Post crh
by crh
06-25-2012, 12:08 PM  
Implementation of IGV or IGB tool on web page. by kumardeep
Started by kumardeep, 06-23-2012, 12:46 AM
1 response
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 Last Post GenoMax
by GenoMax
06-25-2012, 03:50 AM  
merging fastq running bwa gives different results from running bwa then merging sam. by bw.
Started by bw., 06-24-2012, 09:03 PM
1 response
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 Last Post xied75
by xied75
06-25-2012, 03:08 AM  
Does GATK only work for human species? by AllenLee_china
Started by AllenLee_china, 06-25-2012, 12:08 AM
4 responses
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 Last Post AllenLee_china
by AllenLee_china
06-25-2012, 01:44 AM  
DEXSeq splicing plot from CuffDiff output by jasmin9x
Started by jasmin9x, 06-22-2012, 07:49 AM
1 response
2,070 views
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 Last Post areyes
by areyes
06-25-2012, 01:08 AM  
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