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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,262 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
de novo hybrid assembly by glacerda
Started by glacerda, 08-05-2008, 04:30 PM
6 responses
7,289 views
0 reactions
 Last Post Irsan_Kooi
by Irsan_Kooi
07-17-2011, 11:30 AM  
Velvet de novo assembly to amosvalidate by canuck
Started by canuck, 08-20-2008, 08:16 AM
5 responses
6,281 views
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 Last Post Irsan_Kooi
by Irsan_Kooi
07-17-2011, 11:24 AM  
samtools view error after reheader by Hkins552
Started by Hkins552, 07-11-2011, 11:08 AM
3 responses
5,834 views
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 Last Post jjpurwar
by jjpurwar
07-17-2011, 10:32 AM  
converting UCSC gene names to Hugo Symbol names by efoss
Started by efoss, 07-16-2011, 12:31 PM
2 responses
7,164 views
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 Last Post efoss
by efoss
07-16-2011, 12:41 PM  
cuffcompare tss_id by arrchi
Started by arrchi, 07-15-2011, 01:05 PM
0 responses
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 Last Post arrchi
by arrchi
07-15-2011, 01:05 PM  
Truncated BAM files from 1000GP by gene coder
Started by gene coder, 07-06-2011, 06:32 AM
4 responses
4,197 views
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 Last Post frymor
by frymor
07-15-2011, 10:02 AM  
GS-FLX (454) v2.6 software can output .bam by pmiguel
Started by pmiguel, 07-15-2011, 09:19 AM
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 Last Post pmiguel
by pmiguel
07-15-2011, 09:19 AM  
Mapping very short (<20 bp) reads by hclee
Started by hclee, 07-14-2011, 08:35 PM
4 responses
2,717 views
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 Last Post mnkyboy
by mnkyboy
07-15-2011, 08:53 AM  
Script Help by DrD2009
Started by DrD2009, 07-14-2011, 06:05 PM
4 responses
2,149 views
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 Last Post kwatts59
by kwatts59
07-15-2011, 08:17 AM  
error from SOAPdenovo by shuang
Started by shuang, 07-14-2011, 08:41 AM
6 responses
3,792 views
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 Last Post shuang
by shuang
07-15-2011, 07:43 AM  
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