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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc
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Started by laura, 05-09-2011, 04:42 AM
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35 responses
107,316 views
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by laura
12-05-2013, 02:37 AM
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Started by sci_guy, 01-23-2008, 11:19 PM
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236 responses
682,828 views
1 reaction
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by ECO
12-25-2009, 06:45 PM
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Started by capricy, 06-07-2017, 04:54 PM
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0 responses
1,186 views
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by capricy
06-07-2017, 04:54 PM
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Started by tnabtaf, 06-07-2017, 11:39 AM
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0 responses
1,710 views
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by tnabtaf
06-07-2017, 11:39 AM
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Started by crh, 06-06-2017, 05:47 PM
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6 responses
3,736 views
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by crh
06-07-2017, 10:44 AM
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Started by rezap222, 01-22-2017, 11:38 PM
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2 responses
1,893 views
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by rezap222
06-07-2017, 06:43 AM
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Started by lcdog, 06-07-2017, 01:31 AM
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2 responses
1,440 views
0 reactions
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by jonfoox
06-07-2017, 06:35 AM
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Can't find show-aligns in mummer
by Guest
Started by Guest, 06-07-2017, 02:33 AM
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0 responses
2,906 views
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by Guest
06-07-2017, 02:33 AM
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Started by furor, 04-21-2017, 11:25 AM
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8 responses
3,252 views
0 reactions
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Last Post
by GenoMax
06-06-2017, 11:35 AM
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Started by meriem, 06-06-2017, 08:09 AM
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0 responses
1,133 views
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by meriem
06-06-2017, 08:09 AM
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Started by Oetam, 01-19-2017, 03:32 PM
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3 responses
3,479 views
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Last Post
by macarima
06-04-2017, 09:45 AM
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Started by jarwulf, 06-04-2017, 04:34 AM
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0 responses
1,100 views
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by jarwulf
06-04-2017, 04:34 AM
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by SEQadmin2
Childhood cancers, effectively fatal 60 years ago, are now curable for up to 85% of children with access to contemporary treatments and...-
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05-08-2026, 01:42 AM -
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by GATTACATLove this - good data definitely starts from good input, and poor input can only give relatively poor data. I particularly like the mention of Nanodrop/absorbance based methods for quantification. It's such a toss up if you'll get an accurate reading or what amounts to a randomly generated number, and a lot of library/sequencing related issues can be traced back to poor quant.
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Channel: Articles
07-01-2026, 11:43 AM -
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by SEQadmin2
I’m not a sequencing expert. I’m a purification scientist who uses NGS to evaluate workflows my group develops. With this perspective, we think about the sample first and the NGS workflow second. The sequencer is an exceptionally honest reporter, but it can only report on what you give it, so whether you get clean, interpretable data from an NGS workflow is largely determined before you begin.
Here are nine questions we think about, in roughly the order they matter, before...-
Channel: Articles
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by SEQadmin2
Data variability is still an issue in sequencing technologies despite the advances in reproducibility and accuracy of these platforms. But the problem does not originate in the sequencing itself, but in the previous steps, before the sample reaches the sequencer.
The first step is collection, followed by preservation and sample preparation for analysis. Most scientists overlook those steps, but not being careful might just be skewing the experiment’s results.
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Channel: Articles
06-02-2026, 10:05 AM -
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Started by SEQadmin2, 07-02-2026, 11:08 AM
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0 responses
12 views
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by SEQadmin2
07-02-2026, 11:08 AM
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Started by SEQadmin2, 06-30-2026, 05:37 AM
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0 responses
15 views
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by SEQadmin2
06-30-2026, 05:37 AM
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Started by SEQadmin2, 06-26-2026, 11:10 AM
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0 responses
20 views
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Last Post
by SEQadmin2
06-26-2026, 11:10 AM
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