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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,261 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
BEDTools support for BAM/GFF/BED12 by quinlana
Started by quinlana, 01-11-2010, 07:34 PM
1 response
5,909 views
0 reactions
 Last Post dawe
by dawe
01-12-2010, 01:20 AM  
Removing multi-matched sequences in Bowtie by gwilson
Started by gwilson, 12-16-2009, 05:52 AM
8 responses
3,735 views
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 Last Post Xi Wang
by Xi Wang
01-12-2010, 12:58 AM  
parallelizing MAQ & BWA by mhmckm
Started by mhmckm, 09-03-2009, 05:05 PM
11 responses
6,547 views
0 reactions
 Last Post geschickten
by geschickten
01-11-2010, 11:36 PM  
Gap Analysis Spread Sheet by virushunter
Started by virushunter, 01-11-2010, 07:46 AM
0 responses
2,407 views
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 Last Post virushunter
by virushunter
01-11-2010, 07:46 AM  
euler-sr problems by v_kisand
Started by v_kisand, 01-06-2010, 01:43 AM
1 response
4,205 views
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 Last Post v_kisand
by v_kisand
01-10-2010, 11:30 PM  
controlling clipping behavior in bwa 'aln' and 'bwtsw' aligners by jnfass
Started by jnfass, 10-20-2009, 01:56 PM
1 response
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 Last Post elalo
by elalo
01-10-2010, 02:49 PM  
Viewers for Blast and Blat alignments by dgacquer
Started by dgacquer, 11-13-2009, 02:20 AM
4 responses
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 Last Post houhuabin
by houhuabin
01-09-2010, 09:33 PM  
bowtie, no .rev files produced by chrisbala
Started by chrisbala, 01-07-2010, 11:23 AM
6 responses
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 Last Post chrisbala
by chrisbala
01-09-2010, 07:46 AM  
velvet assembly viewer? by mdachoh
Started by mdachoh, 01-09-2010, 06:20 AM
0 responses
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 Last Post mdachoh
by mdachoh
01-09-2010, 06:20 AM  
how to get snps by zslee
Started by zslee, 01-07-2010, 03:50 AM
2 responses
2,166 views
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 Last Post zslee
by zslee
01-09-2010, 05:03 AM  
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