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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,260 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
fastq xdget? Mosaik issue by jgibbons1
Started by jgibbons1, 01-06-2010, 08:29 AM
7 responses
3,535 views
0 reactions
 Last Post gpertea
by gpertea
01-08-2010, 11:50 AM  
percentage of SNP calling in MAQ by johnsequence
Started by johnsequence, 01-06-2010, 01:35 PM
1 response
1,936 views
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 Last Post apfejes
by apfejes
01-08-2010, 10:54 AM  
cuffcompare issue with many input gtf files by choy
Started by choy, 01-06-2010, 07:27 PM
1 response
2,808 views
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 Last Post gpertea
by gpertea
01-08-2010, 10:49 AM  
MAQ alignment by tsucheta
Started by tsucheta, 01-06-2010, 10:00 AM
1 response
1,831 views
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 Last Post francois.sabot
by francois.sabot
01-08-2010, 07:58 AM  
Illumina-Genome Studio & Gap Identification by kforcec
Started by kforcec, 01-07-2010, 11:38 AM
0 responses
2,526 views
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 Last Post kforcec
by kforcec
01-07-2010, 11:38 AM  
Galaxy RNA questions by dog_sparky
Started by dog_sparky, 01-07-2010, 07:44 AM
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 Last Post dog_sparky
by dog_sparky
01-07-2010, 07:44 AM  
sam output from novoalign by bioinfosm
Started by bioinfosm, 12-30-2009, 01:11 PM
1 response
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 Last Post bioinfosm
by bioinfosm
01-06-2010, 02:04 PM  
RNA SEQ Bias toward short transcripts (RPKM) by vruotti
Started by vruotti, 01-06-2010, 08:19 AM
4 responses
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 Last Post Zigster
by Zigster
01-06-2010, 11:09 AM  
Scaffolding problem with Velvet by Melissa
Started by Melissa, 12-23-2009, 01:58 AM
2 responses
3,016 views
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 Last Post Melissa
by Melissa
01-05-2010, 07:44 PM  
RNA-seq paired-end sequencing by djm2007
Started by djm2007, 01-05-2010, 12:16 PM
0 responses
2,417 views
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 Last Post djm2007
by djm2007
01-05-2010, 12:16 PM  
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